PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010106656.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family C2H2
Protein Properties Length: 510aa    MW: 56584.9 Da    PI: 8.5289
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010106656.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2163.5e-05104126123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     + C+ Cgk F ++  L  H+++H
  XP_010106656.1 104 FCCKECGKGFQSWKALFGHMKSH 126
                     78********************9 PP

2zf-C2H211.80.00077423445123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++Cp+C k+F++   L  H r+H
  XP_010106656.1 423 HECPICLKVFPSGQALGGHKRSH 445
                     79******************999 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576671.27E-9931No hitNo description
SMARTSM003550.25931IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.64936IPR007087Zinc finger, C2H2
PfamPF139122.8E-5932IPR007087Zinc finger, C2H2
PROSITE patternPS0002801131IPR007087Zinc finger, C2H2
SuperFamilySSF576671.27E-999126No hitNo description
SMARTSM003550.0012104126IPR015880Zinc finger, C2H2-like
Gene3DG3DSA:3.30.160.608.2E-4104129IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PfamPF139121.4E-8104128IPR007087Zinc finger, C2H2
PROSITE profilePS5015711.988104131IPR007087Zinc finger, C2H2
PROSITE patternPS000280105126IPR007087Zinc finger, C2H2
PfamPF139121.1E-10340365IPR007087Zinc finger, C2H2
PROSITE profilePS5015710.284341368IPR007087Zinc finger, C2H2
SMARTSM003550.26341363IPR015880Zinc finger, C2H2-like
SuperFamilySSF576672.17E-6341363No hitNo description
PROSITE patternPS000280343363IPR007087Zinc finger, C2H2
SuperFamilySSF576672.17E-6418445No hitNo description
SMARTSM003550.071423445IPR015880Zinc finger, C2H2-like
PROSITE profilePS501578.995423445IPR007087Zinc finger, C2H2
PfamPF139127.3E-13423445IPR007087Zinc finger, C2H2
PROSITE patternPS000280425445IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 510 aa     Download sequence    Send to blast
MEEVQELKHA CKFCSKSFPC GRSLGGHMRS HLTNNNSTEK TDHEKLNINR IISFTTTNTN  60
GGSKFNTETS SSCFVYGYGL RENPKKTSRF SDNISSDQEN SNLFCCKECG KGFQSWKALF  120
GHMKSHSDKE KVSLLEEEQD SSMNSANLKL VMDSQSDNET AAPSNSRKKR RRSQRRTRYN  180
IINNVNASSS AASEIEQEQE EVAMCLMMLS RDFGGSKSVA ESSDNFSELS KSPPSTKTSR  240
IMSGGNKTCS EFSRTKKLRN GNSWSKMSRT EVSSDGFLGK DKKILVKEEK FVEKLKSSTR  300
KLPYDDNGDD DEAYYDPELR ADSLKISDPD MPKSSQKRSR FECLTCNKTF HSYQALGGHR  360
ASHKKNKGCF ASSTIESSEN SIETEGGDEN NKPKNHHFTN IESLINDGED HQSKAEIKKS  420
KGHECPICLK VFPSGQALGG HKRSHLVGGG GASDAKTATR AAVPTVVPKK SVPKIRDFLD  480
LNLPAPDEED NSNGHVNGLE AATNMRLLWV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010106656.10.0Zinc finger protein ZAT4
TrEMBLW9S5D10.0W9S5D1_9R
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF11013080
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45120.12e-26C2H2-like zinc finger protein